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Tn-seq analysis pipeline (improved3)

作者: gene_x

概要:

> only one mutant, PacBio long-sequencing find the positions of transp

Call and merge SNP and Indel results from using two variant calling methods

作者: gene_x

概要:

1. call variant calling using snippy

mv snippy_HDRNA_01 snipp

piRNA 2024 Ute from raw counts

作者: gene_x

概要:

Draw plots for piRNA generated by COMPSRA

1. Generate the following f

miRNA 2024 Ute from raw counts

作者: gene_x

概要:

1. Generate the following files according to STEPS 1-4 from http://xge

RNA-seq 2024 Ute from raw counts

作者: gene_x

概要:

[![DEGs_heatmap_WaGa](/static/rnaseq_smallrnaseq_ute/DEGs_heatmap_WaGa

Essential Open Source Software for Science (EOSS)

作者: gene_x

概要:

> https://chanzuckerberg.com/eoss/proposals/?cycle=1,2,3,4,5,6,d-i,

T

Key Bioconductor and R Packages for Bioinformatics

作者: gene_x

概要:

Top Bioconductor Packages

* DESeq2: Differential gene expression anal

Tn-seq analysis pipeline (improved2)

作者: gene_x

概要:

[![tnseq_principle](/static/transposon_seq_strategies/tnseq_principle.

Copy a Conda environment from one computer to another

作者: gene_x

概要:

1, Export the Conda Environment

On the original computer, you can e

Viral variant calling

作者: gene_x

概要:

1: trimming using trimmomatic

mkdir trimmed bams
for

gene_x

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