Author: gene_x

Abstract: 1. Preparing raw data They are wildtype strains grown in different medium. Urine - human urine AUM - artificial urine medium MHB - Mueller-Hinton broth Urine（人

Author: gene_x

Abstract: 1. Input data # name condition # ---------------------------------------------- # 0403_WaGa_wt parental_cells_1.fastq.gz # #050

Author: gene_x

Abstract: 1. Prepare input raw data /mnt/md1/DATA/Data_Sophie_HDV_Sequences/raw_data for f in *_R[12]_001.fastq.gz; do newname="$(echo "$f" | awk -F_ '{print $1 "_" $4 ".fastq.gz"}')"; echo mv

Author: gene_x

Abstract: 1. Environment Setup: It sets up a Conda environment named picrust2, using the conda create command and then activates this environment using conda activate picrust2. #https://github.com/picr

Author: gene_x

Abstract: 1. Install and test qiime2-docker #Cannot run under QIIME1, switch to QIIME2: pick_open_reference_otus.py -r/home/jhuang/REFs/SILVA_132_QIIME_release/rep_set/rep_set_16S_only/99/silva_132_99_

Author: gene_x

Abstract: 1. Input data: ln -s ../raw_data_2024/hCoV229E_Rluc_R1.fastq.gz hCoV229E_Rluc_R1.fastq.gz ln -s ../raw_data_2024/hCoV229E_Rluc_R2.fastq.gz hCoV229E_Rluc_R2.fastq.gz ln -s ../r

Author: gene_x

Abstract: > TODO: 以后只用 丁基胶带 粘Wintergarten上 玻璃的侧边和金属的连接处！ > HSButyl FoilBand > https://www.hsbutyl.com/de/product/foilband-butyl-tape/ > Das Premium Glasfalz Silikon OTTOSEAL S120 310ml Alle Farben (Transparen

Author: gene_x

Abstract: 1. Prepare input raw data ~/DATA/Data_DAMIAN_Post-processing_Flavivirus_and_FSME ln ./240621_M03701_0312_000000000-GHL9N/p20534/7448_7501_S0_R1_001.fastq.gz p20534_7448_R1.fastq.gz

Author: gene_x

Abstract: Genomics * Genome Assembly * Genome Annotation * Comprehensive Genome Analysis (B) * BLAST * Primer Design * Similar Genome Finder * Genome Alignment * Variation Analysis *

Author: gene_x

Abstract: Correlating RNA-seq data with mass spectrometry (MS)-based proteomics data is a powerful way to link transcript-level expression with protein-level abundance. Here’s a step-by-step outline of how to a