There are 332 articles for you to read.

Insertion Sequence (IS) Element Detection

Author: gene_x

Abstract: 1. Bioinformatics Methods Sequence Extraction and Comparative Analysis Genomic regions surrounding the multidrug efflux MFS transporter were extracted from five isolates of Acinetobacter b

干眼症

Author: gene_x

Abstract: > https://www.mayoclinic.org/zh-hans/diseases-conditions/dry-eyes/symptoms-causes/syc-20371863 概述 干眼症是一种常见状况,发生在眼泪不能给眼睛提供足够润滑时。多种原因都可能导致眼泪不充足或不稳定。例如,如果您的眼泪分泌不足或质量不高,就会出现干眼症。这种泪液的不稳定性会导致眼睛表面发生炎症和损伤。

Small RNA-seq analysis pipeline XICRA

Author: gene_x

Abstract: > https://github.com/cougarlj/COMPSRA/issues/18 > https://github.com/HCGB-IGTP/XICRA [![XICRA_pipeline](/static/rnaseq_smallrnaseq_ute/XICRA_pipeline.png "XICRA_pipeline")](/static/rnaseq_smallrnase

Tn-seq analysis pipeline (improved3)

Author: gene_x

Abstract: > only one mutant, PacBio long-sequencing find the positions of transposons > Häufigkeit in mixed mutants using short-sequencing > DEGs regarding Häufigkeit using short-sequencing [![circos_on_CP00

Call and merge SNP and Indel results from using two variant calling methods

Author: gene_x

Abstract: 1. call variant calling using snippy mv snippy_HDRNA_01 snippy_CP133676 mv snippy_HDRNA_03 snippy_CP133677 cp -r snippy_HDRNA_06 snippy_CP133678 mv snippy_HDRNA_06 s

piRNA 2024 Ute from raw counts

Author: gene_x

Abstract: Draw plots for piRNA generated by COMPSRA 1. Generate the following files according to STEPS 1-4 from http://xgenes.com/article/article-content/239/small-rna-sequencing-processing-in-the-example-of-s

miRNA 2024 Ute from raw counts

Author: gene_x

Abstract: 1. Generate the following files according to STEPS 1-4 from http://xgenes.com/article/article-content/239/small-rna-sequencing-processing-in-the-example-of-smallrna-7/, http://xgenes.com/article/artic

RNA-seq 2024 Ute from raw counts

Author: gene_x

Abstract: [![DEGs_heatmap_WaGa](/static/rnaseq_smallrnaseq_ute/DEGs_heatmap_WaGa.png "DEGs_heatmap_WaGa")](/static/rnaseq_smallrnaseq_ute/DEGs_heatmap_WaGa.png "DEGs_heatmap_WaGa") 1, input files (use R 4.3.3

Essential Open Source Software for Science (EOSS)

Author: gene_x

Abstract: > https://chanzuckerberg.com/eoss/proposals/?cycle=1,2,3,4,5,6,d-i, The Chan Zuckerberg Initiative (CZI) has funded numerous open source software projects through its Essential Open Source Software f

Key Bioconductor and R Packages for Bioinformatics

Author: gene_x

Abstract: Top Bioconductor Packages * DESeq2: Differential gene expression analysis based on the negative binomial distribution. * edgeR: Differential expression analysis of RNA-Seq and other count data. * lim


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