Author: gene_x

Abstract: [](/static/Yersiniomics/ggtree_and_gheatmap_198.png "ggtree_and_gheatmap_198") >Pathogenicity of

Author: gene_x

Abstract: Preparing a GTF file from GenBank for bacterial RNA-seq analysis, using the example of WA 1. In the example Yersinia enterocolitica strain WA #[IMPORTANT FINAL STEPS] [STEP1] genbank

Author: gene_x

Abstract: The terms "molecular biomarker" and "genomic biomarker" refer to specific types of biomarkers used in the field of biomedicine for diagnosis, prognosis, and monitoring the response to treatment, among

Author: gene_x

Abstract: BCR (B-cell receptor) sequencing and TCR (T-cell receptor) sequencing are molecular techniques used to analyze the genetic diversity of B-cell and T-cell receptors within an immune response. These rec

Author: gene_x

Abstract: > Original text please find under https://www.biorxiv.org/content/10.1101/2024.01.22.576744v1.full 1. The structural proteome of eukaryotic viruses /ˈproʊ.ti.oʊm/ (Fig. 1 + Supplementary Fig. 1) [![

Author: gene_x

Abstract: 1. In the example RP62A #[IMPORTANT FINAL STEPS] [1] python3 gff_to_gtf.py RP62A.gff3 RP62A.gtf or python3 ~/Scripts/genbank_to_gtf.py 1585.gb 1585.gtf [2] python3 modify_gtf

Author: gene_x

Abstract: 1. Data input and generate PCA plot # Import the required libraries library("AnnotationDbi") library("clusterProfiler") library("ReactomePA") library(gplots)

Author: gene_x

Abstract: 1. goal #p604 and p601 to sT transcript #p602 and p600 to LT transcript #p605 and p600 to LTtr transcript (or LT transcript is also fine) p602+604 compared to sT tran

Author: gene_x

Abstract: 1. prepare input reads and samplesheet ln -s ./F23A430001245_SEPiovzP/soapnuke/clean/EX_15_min_A/EX_15_min_A_1.fq.gz . ln -s ./F23A430001245_SEPiovzP/soapnuke/clean/EX_15_min_A/EX_15_

Author: gene_x

Abstract: >TODO: after annotation check if the app-gene has been truncated in 5179-R1. The 5179 generates 180 kDa and 220 kDa (isoforms) while 5179-R1 generated only a 140 kDa protein. # See the paper: Ind