Author: gene_x

Abstract: > only one mutant, PacBio long-sequencing find the positions of transposons > Häufigkeit in mixed mutants using short-sequencing > DEGs regarding Häufigkeit using short-sequencing [![circos_on_CP00

Author: gene_x

Abstract: 1. call variant calling using snippy mv snippy_HDRNA_01 snippy_CP133676 mv snippy_HDRNA_03 snippy_CP133677 cp -r snippy_HDRNA_06 snippy_CP133678 mv snippy_HDRNA_06 s

Author: gene_x

Abstract: Draw plots for piRNA generated by COMPSRA 1. Generate the following files according to STEPS 1-4 from http://xgenes.com/article/article-content/239/small-rna-sequencing-processing-in-the-example-of-s

Author: gene_x

Abstract: 1. Generate the following files according to STEPS 1-4 from http://xgenes.com/article/article-content/239/small-rna-sequencing-processing-in-the-example-of-smallrna-7/, http://xgenes.com/article/artic

Author: gene_x

Abstract: [](/static/rnaseq_smallrnaseq_ute/DEGs_heatmap_WaGa.png "DEGs_heatmap_WaGa") 1, input files (use R 4.3.3

Author: gene_x

Abstract: > https://chanzuckerberg.com/eoss/proposals/?cycle=1,2,3,4,5,6,d-i, The Chan Zuckerberg Initiative (CZI) has funded numerous open source software projects through its Essential Open Source Software f

Author: gene_x

Abstract: Top Bioconductor Packages * DESeq2: Differential gene expression analysis based on the negative binomial distribution. * edgeR: Differential expression analysis of RNA-Seq and other count data. * lim

Author: gene_x

Abstract: [](/static/transposon_seq_strategies/tnseq_principle.png "tnseq_principle") [![circos](/static/transposon_se

Author: gene_x

Abstract: 1, Export the Conda Environment On the original computer, you can export the environment to a YAML file. This file will contain all the necessary details about the environment, including the packag

Author: gene_x

Abstract: 1: trimming using trimmomatic mkdir trimmed bams for sample in hCoV229E_Rluc p10_DMSO p10_K22 p10_K7523; do \ java -jar /home/jhuang/Tools/Trimmomatic-0.36/trimmomatic-0.3